How can we help?

SMSF Tax

SMSF tax return due dates

New self-managed super funds (SMSFs) generally need to lodge their first annual return by 28 February.

For the second and subsequent years, SMSF annual returns are generally due by 15 May.

SMSF financial statements and tax returns need specialist support

From a practical perspective, you can’t prepare and lodge your SMSF’s financial statements and tax return yourself unless you’re a registered tax agent with the specialist accounting knowledge required to complete the reporting accurately and compliantly.

Contributions tax isn’t deducted automatically

Unlike industry or retail super funds, an SMSF doesn’t automatically deduct 15% tax from employer contributions when they’re made.

Your SMSF still needs to pay 15% tax on these contributions. The amount is assessed when the annual tax return is prepared after the end of the financial year, with any allowable deductions applied.

Most SMSFs pay income tax annually

Most SMSFs only need to pay income tax once a year. Payment is generally due by the tax return lodgement date.

If an SMSF has tax payable for one financial year, it’s likely to be required to make pay as you go (PAYG) instalments in the following financial year. These are advance tax payments based on the Australian Taxation Office’s (ATO) estimate of the fund’s tax liability.

PAYG instalments are generally paid quarterly. If the estimated annual tax is $8,000 or less, you may be able to elect to pay annually by 21 October.

Paying annually means your SMSF can retain the cash in its account for longer.

Capital gains are generally taxed at 15%

Capital gains are generally taxed at 15%. If an investment has been held for at least 12 months, the one-third capital gains tax (CGT) discount may reduce the effective tax rate to 10%.

By default, our SMSF accounting system calculates capital gains using the available share or stock parcels that result in the lowest gain based on their specific cost bases.

GST registration may not be worthwhile

Stake Super SMSFs generally don’t pay enough goods and services tax (GST) for registration to be worthwhile.

However, this can be reviewed if your SMSF incurs a significant amount of GST on expenses or transactions.

You can elect to pay Division 293 tax from your SMSF

You have up to 60 days from the date of your Division 293 assessment to complete the election form through myGov or lodge a paper form.

To complete the election online, you’ll need a myGov account linked to ATO Online Services. Once your account is linked, the Australian Taxation Office should appear under your linked services when you log in to myGov.

To make an election:

  1. Log in to myGov and select the ATO service to access ATO Online Services
  2. Select the ‘Super’ tab from the top menu
  3. Scroll down and select ‘Manage’ to open the submenu
  4. Select ‘Division 293 election’
  5. View your available elections
  6. Choose the super fund you want to pay the Division 293 tax from. If your SMSF isn’t listed, contact us at smsf@hellostake.com
  7. Complete the declaration and lodge your election

Once the election form is lodged, we should receive a ‘Notice to pay’. Let us know if we should expect one.


Did you find this helpful?

Still need a hand?

Footer


Made in Australia

Sydney, Australia

Subscribe to our newsletter

By subscribing, you agree to our Privacy Policy.



Get the app

Scan QR code to download the app

Stakeshop Pty Ltd, trading as Stake, ACN 610 105 505, is an authorised representative (Authorised Representative No. 1241398) of Stakeshop AFSL Pty Ltd (Australian Financial Services Licence no. 548196). Stake SMSF Pty Ltd ACN 648 283 532 (‘Stake Super’) is not licensed to provide financial product advice under the Corporations Act. This specifically applies to any financial products which are established if you instruct Stake Super to set up a self managed super fund (‘SMSF’). When you sign up to Stake Super, you are contracting with Stake SMSF Pty Ltd who will assist in the establishment of a SMSF under a ‘no advice model’. You will also be referred to Stakeshop Pty Ltd to enable your trading account and bank account to be set up in order to use the Stake Website and/or App. For more information about SMSFs, see our SMSF Risks page. The Stake Accumulate Fund (ARSN 680 653 374) is issued by K2 Asset Management Ltd (ABN 95 085 445 094 AFSL 244 393), a wholly owned subsidiary of K2 Asset Management Holdings Ltd (ABN 59 124 636 782). The information on our website or our mobile application is not intended to be an inducement, offer or solicitation to anyone in any jurisdiction in which Stake is not regulated or able to market its services. At Stake and Stake Super, we’re focused on giving you a better investing experience but we don’t take into account your personal objectives, circumstances or financial needs. Any advice given by Stake is of a general nature only. As investments carry risk, before making any investment decision, please consider if it’s right for you and seek appropriate taxation and legal advice. Please view our Financial Services GuideTerms & ConditionsPrivacy Policy and Disclaimers before deciding to invest on or use Stake or Stake Super. By using our website or service in any way, you agree to our Privacy Policy and Terms & Conditions. All financial products involve risk and you should ensure you understand the risks involved as certain financial products may not be suitable to everyone. Past performance of any product described on this website is not a reliable indication of future performance. Stake and Stake Super are registered trademarks in Australia.

Copyright © 2026 Stake. All rights reserved.